Bioinformatics Insights

Welcome to our Rumble video on Protein Modeling (Homology Modeling)! 🧬 In this video, we dive deep into the fascinating world of protein structure prediction using homology modeling. Homology modeling is a powerful technique that allows scientists to accurately predict the 3D structure of a protein based on the known structure of a related protein. Join us as we explore the principles behind homology modeling, the tools and algorithms used for this process, and the applications of this technique in drug discovery, enzyme engineering, and understanding protein function. Whether you are a student, researcher, or just curious about the secrets hidden within proteins, this video is for you! Our expert presenters will guide you through the steps of homology modeling and share real-world examples of how this approach has revolutionized the field of bioinformatics. Don't miss this exciting opportunity to unravel the mysteries of protein structure and witness the cutting-edge technology that drives modern scientific discoveries. Hit that "Subscribe" button and turn on notifications to stay updated on the latest developments in protein modeling and computational biology. 🔬 Let's embark on this incredible journey of protein exploration together! 🚀 #ProteinModeling #HomologyModeling #Bioinformatics #ProteinStructure #DrugDiscovery #ComputationalBiology #proteinstructure #howproteinsarefolding, #proteinfolding #structureofaprotein #structure

Welcome to our Basic PyMOL Tutorial for Beginners! 🔬 In this comprehensive tutorial, we'll take you through the essentials of PyMOL, a powerful tool for visualizing molecular structures. Whether you're a student, researcher, or just curious about the world of molecules, this tutorial is perfect for you. What You'll Learn: 1. Introduction to PyMOL's interface and workspace. 2. Loading molecular structures from PDB files 3. Manipulating and rotating molecules for better visualization 4. Applying colors and styles to different components 5. Creating stunning molecular images and snapshots 6. Structural alignment and superimposition.

Here we discuss the key areas in protein research.

This video is Part 2 of this series. In case you have not watched part 1, I am afraid you may not feel comfortable understanding this video.

URL: https://colab.research.google.com/github/Ash100/DaS In this comprehensive tutorial, we'll show you step-by-step how to mine the PubChem database for similar compounds. Whether you're a researcher, chemist, or simply curious about chemical structures, this video will equip you with the skills to explore chemical diversity and find compounds related to your area of interest. Learning Objectives: 1. Introduction to PubChem: Understand the importance of PubChem as a valuable resource for chemical information. 2. Data Retrieval: Learn how to access the PubChem database and gather the chemical data you need. 3. Structure-Based Searches: Discover how to perform structure-based searches to find compounds with similar chemical structures. 4. Substructure and Similarity Searches: Explore advanced search techniques, including substructure and similarity searches, to pinpoint compounds of interest. 5. Filtering and Analysis: Learn how to filter and analyze your search results to focus on the most relevant compounds. 6. Visualization: Use visualization tools to gain insights into the chemical structures of the retrieved compounds. By the end of this tutorial, you'll have the knowledge and skills to harness the power of the PubChem database for your research, drug discovery, or chemical exploration projects. Don't miss out on this essential guide to efficiently mining chemical data and finding similar compounds in the vast world of chemistry! Subscribe, like, and hit the notification bell to stay updated on our latest tutorials and educational content. #ChemicalMining #PubChemDatabase #ChemicalExploration #ChemicalDiscovery #ChemicalDiversity #ChemicalData #Chemoinformatics #DrugDiscovery #ChemicalResearch #DataMining #ChemicalAnalysis #StructureSearch #SimilarCompounds #ChemicalInsights #ChemicalVisualization #ChemicalInformation #ChemicalQueries #ChemicalKnowledge #ChemicalScientists #PubChemTutorial Keywords: PubChem mining; Chemical database; exploration Similar compound search; Chemical data analysis; Drug discovery research; Structure-based search; Chemical diversity exploration; Substructure search; Similarity search; Chemical data retrieval; Data filtering and analysis; Chemical visualization techniques; Chemical structure analysis; Chemical information retrieval; Computational chemistry; Chemoinformatics tools; Chemical research methods Molecular database search; Chemical compound screening; PubChem tutorial

Welcome. You are watching this video tutorial on installing the open-source molecular visualization tool, PyMOL! In this video, we'll walk you through the step-by-step process of setting up PyMOL on your system. Whether you're a researcher, student, or educator in the field of biochemistry, molecular biology, and bioinformatics, PyMOL can be an invaluable tool for visualizing complex molecular structures and interactions. Follow along to learn how to download, install, and configure PyMOL to enhance your understanding and analysis of molecular data. Dive into the world of molecular visualization with PyMOL and unlock new insights into the intricate world of biomolecules. Python Download Link: https://www.python.org/downloads/windows/ Microsoft Visual C++: https://learn.microsoft.com/en-us/cpp/windows/latest-supported-vc-redist?view=msvc-170 Required Wheels: Numpy: numpy‑1.22.4+mkl‑cp310‑cp310‑win_amd64.whl PMW: Pmw‑2.0.1‑py3‑none‑any.whl Pymol: pymol‑2.5.0‑cp310‑cp310‑win_amd64.whl Pymol_launcher: pymol_launcher‑2.5‑cp310‑cp310‑win_amd64.whl Installation command for all wheels: py -m pip install your_wheel_file.whl Detecting installation PATH command: py -c "import os, sys; print(os.path.dirname(sys.executable))

Downloadable Link: http://ibs.biocuckoo.org/download.php This video demonstration will teach you in a quick time, how to illustrate your biological sequence information for thesis, reports, and scientific papers and manuscripts. #CUCKOO #bioinformatics #illustrator #bioinformatics #illustrator #Biologicalillustrator #CUCKOO #manuscripts #scientificillustration #France #bioinformaticsforbeginners #manuscript

In this video tutorial, I will walk you through a step-by-step methodology for efficiently retrieving sequence data in large quantities.

In this video, I will guide you through the process of creating visually appealing and high-quality images of entire genes and proteins that are suitable for publication. Feel free to ask any questions you may have.

I have made this video for beginners who are naive to PyMol visualization software. This demonstration provides you with basic steps and functionalities of protein handling in PyMol.